STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9VUD8AAI domain-containing protein; Belongs to the plant LTP family. (186 aa)    
Predicted Functional Partners:
A0A2C9UD04
Uncharacterized protein.
    
 0.601
A0A2C9W4M4
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
 
  0.526
A0A0M4FBT5
NAC transcription factors 78.
  
 
  0.512
A0A2C9UB04
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
 
  0.511
A0A2C9UQC0
Protein kinase domain-containing protein.
    
 0.507
A0A2C9V057
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
 
  0.507
A0A2C9W3V9
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
 
  0.505
A0A2C9UHS3
B30.2/SPRY domain-containing protein.
    
 0.497
A0A0M4G3Q4
NAC transcription factors 49.
  
     0.494
A0A2C9W4W5
Phytocyanin domain-containing protein.
  
 
  0.491
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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