STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9VXI1Aa_trans domain-containing protein. (513 aa)    
Predicted Functional Partners:
A0A251KBU4
Aa_trans domain-containing protein.
  
     0.446
A0A2C9W653
F-box domain-containing protein.
    
 
 0.445
A0A2C9V3L2
Aa_trans domain-containing protein.
  
     0.440
A0A2C9VMC7
Aa_trans domain-containing protein.
  
     0.439
A0A2C9UZW1
Aa_trans domain-containing protein.
  
     0.436
A0A2C9W2Z8
Aa_trans domain-containing protein.
  
     0.436
A0A2C9VAW9
Aa_trans domain-containing protein.
  
     0.425
A0A2C9WEE5
Aa_trans domain-containing protein.
  
     0.422
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.