STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9WCK8Endoglucanase. (485 aa)    
Predicted Functional Partners:
A0A2C9UD04
Uncharacterized protein.
    
 0.601
A0A2C9UQC0
Protein kinase domain-containing protein.
    
 0.507
A0A2C9UHS3
B30.2/SPRY domain-containing protein.
    
 0.497
A0A2C9VIK6
Cellulase domain-containing protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.490
A0A2C9UYN6
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.480
MANES_S080500
WD_REPEATS_REGION domain-containing protein.
    
 0.444
A0A2C9UQ04
WD_REPEATS_REGION domain-containing protein.
    
 0.444
A0A2C9U619
Nucleoporin_N domain-containing protein.
    
 0.430
A0A251JIY7
Uncharacterized protein.
   
 0.429
A0A2C9VB75
Uncharacterized protein.
    
  0.414
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.