STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9WDU6Uncharacterized protein. (329 aa)    
Predicted Functional Partners:
A0A2C9ULI0
Uncharacterized protein.
     
 0.950
A0A2C9UQT7
Cyclin; Belongs to the cyclin family.
      
 0.558
A0A2C9VC37
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
      
 0.556
A0A2C9VDJ0
DUF3479 domain-containing protein.
      
 0.525
A0A2C9W4I6
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.518
A0A2C9W250
Uncharacterized protein; Belongs to the universal ribosomal protein uS17 family.
      
 0.510
A0A2C9WAY1
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
      
 0.509
A0A2C9UB84
BZIP domain-containing protein.
      
 0.448
A0A2C9V0D8
GUN4 domain-containing protein.
      
 0.441
A0A2C9W6E3
GUN4 domain-containing protein.
      
 0.441
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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