STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9WI04AAA domain-containing protein; Belongs to the AAA ATPase family. (389 aa)    
Predicted Functional Partners:
A0A2C9VWG2
MPN domain-containing protein.
    
 0.816
A0A2C9U7B7
UBX domain-containing protein.
    
 0.767
A0A2C9VG82
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.745
A0A2C9UDY9
OTU domain-containing protein.
    
 0.722
A0A2C9V3B7
TPR_REGION domain-containing protein.
    
 0.712
A0A2C9VNB1
Uncharacterized protein.
    
 0.712
A0A2C9VNU1
Uncharacterized protein.
    
 0.710
A0A2C9UL68
PRKCSH domain-containing protein.
    
 0.683
A0A2C9VAZ3
Josephin domain-containing protein.
   
 0.679
A0A2C9WJG6
U-box domain-containing protein.
   
 
 0.652
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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