STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9WJF0Ribosomal_L18_c domain-containing protein. (297 aa)    
Predicted Functional Partners:
A0A251JKG1
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.997
A0A251JE38
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.996
A0A2C9U518
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 0.996
A0A2C9W9B1
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.996
A0A251JCP9
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.993
A0A251JYV4
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.992
A0A251L5W7
Uncharacterized protein.
   
 
 0.992
A0A251JHW3
Uncharacterized protein.
  
 
 0.991
A0A2C9UR13
KOW domain-containing protein.
  
 0.991
A0A2C9UVT6
KOW domain-containing protein.
  
 0.991
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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