STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2C9WQ84WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (301 aa)    
Predicted Functional Partners:
A0A2C9V5Y2
WD_REPEATS_REGION domain-containing protein.
    
 0.996
A0A2C9VHJ6
WD_REPEATS_REGION domain-containing protein.
    
 0.996
A0A2C9UYN6
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.990
A0A2C9W9U1
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
0.990
A0A2C9W1B9
Peptidase S59 domain-containing protein.
    
 0.986
A0A2C9WJ03
Peptidase S59 domain-containing protein.
    
 0.985
A0A251K751
Uncharacterized protein.
   
 0.982
A0A2C9VFS6
Uncharacterized protein.
   
 0.982
A0A2C9U9U3
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.981
A0A2C9UDC1
Uncharacterized protein.
   
 0.979
Your Current Organism:
Manihot esculenta
NCBI taxonomy Id: 3983
Other names: M. esculenta, Manihot esculenta Crantz, Manihot utilissima, cassava, manioc, tapioca, yuca
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