STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM38833.1Hypothetical protein. (384 aa)    
Predicted Functional Partners:
SFM38877.1
2-methylcitrate dehydratase PrpD.
 
  0.959
SFM38742.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
    0.951
SFM38809.1
Tricarballylate dehydrogenase.
    0.921
SFM93931.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
     
 0.872
SFM99680.1
ThiF family protein.
     
 0.872
SFM38677.1
Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.866
SFM90579.1
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.845
SFN05701.1
4-hydroxy-4-methyl-2-oxoglutarate aldolase.
 
   
 0.754
SFM53094.1
N-acetylglucosaminyl deacetylase, LmbE family.
    
 0.656
SFM49784.1
Ferredoxin-NADP reductase.
  
  
  0.646
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.