STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM45069.1Regulatory protein, Fis family. (476 aa)    
Predicted Functional Partners:
SFM84033.1
PAS domain S-box-containing protein.
  
 0.950
SFM45047.1
PAS domain S-box-containing protein.
 
 0.916
SFM63778.1
PAS domain S-box-containing protein.
  
 0.902
SFM86103.1
PAS domain S-box-containing protein.
  
0.902
SFN01219.1
RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.812
SFM78152.1
Signal transduction histidine kinase.
  
 0.799
SFM45031.1
Hypothetical protein.
       0.780
SFM45009.1
Superoxide reductase.
       0.773
SFM45083.1
Hypothetical protein.
       0.773
SFM49412.1
PAS domain S-box-containing protein.
  
 0.749
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.