Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFM39368.1 | SFM67589.1 | SAMN05660836_00035 | SAMN05660836_01148 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hsp70 protein. | 0.768 |
| SFM39368.1 | SFM67609.1 | SAMN05660836_00035 | SAMN05660836_01149 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Molecular chaperone DnaK (HSP70); Belongs to the heat shock protein 70 family. | 0.768 |
| SFM39368.1 | dnaK | SAMN05660836_00035 | SAMN05660836_00346 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.768 |
| SFM39368.1 | dnaK-2 | SAMN05660836_00035 | SAMN05660836_00674 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.768 |
| SFM39368.1 | groL | SAMN05660836_00035 | SAMN05660836_00314 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.837 |
| SFM39368.1 | grpE | SAMN05660836_00035 | SAMN05660836_00345 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.498 |
| SFM66794.1 | groL | SAMN05660836_01111 | SAMN05660836_00314 | Thioredoxin; Belongs to the thioredoxin family. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.826 |
| SFM66794.1 | groS | SAMN05660836_01111 | SAMN05660836_00315 | Thioredoxin; Belongs to the thioredoxin family. | Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.548 |
| SFM66794.1 | groS-2 | SAMN05660836_01111 | SAMN05660836_00845 | Thioredoxin; Belongs to the thioredoxin family. | Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.548 |
| SFM66794.1 | grpE | SAMN05660836_01111 | SAMN05660836_00345 | Thioredoxin; Belongs to the thioredoxin family. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.703 |
| SFM66794.1 | nuoD | SAMN05660836_01111 | SAMN05660836_01843 | Thioredoxin; Belongs to the thioredoxin family. | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.457 |
| SFM67589.1 | SFM39368.1 | SAMN05660836_01148 | SAMN05660836_00035 | Hsp70 protein. | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.768 |
| SFM67589.1 | SFM67609.1 | SAMN05660836_01148 | SAMN05660836_01149 | Hsp70 protein. | Molecular chaperone DnaK (HSP70); Belongs to the heat shock protein 70 family. | 0.798 |
| SFM67589.1 | groL | SAMN05660836_01148 | SAMN05660836_00314 | Hsp70 protein. | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.871 |
| SFM67589.1 | groS | SAMN05660836_01148 | SAMN05660836_00315 | Hsp70 protein. | Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.732 |
| SFM67589.1 | groS-2 | SAMN05660836_01148 | SAMN05660836_00845 | Hsp70 protein. | Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.732 |
| SFM67589.1 | grpE | SAMN05660836_01148 | SAMN05660836_00345 | Hsp70 protein. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.973 |
| SFM67589.1 | nuoD | SAMN05660836_01148 | SAMN05660836_01843 | Hsp70 protein. | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.503 |
| SFM67609.1 | SFM39368.1 | SAMN05660836_01149 | SAMN05660836_00035 | Molecular chaperone DnaK (HSP70); Belongs to the heat shock protein 70 family. | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.768 |
| SFM67609.1 | SFM67589.1 | SAMN05660836_01149 | SAMN05660836_01148 | Molecular chaperone DnaK (HSP70); Belongs to the heat shock protein 70 family. | Hsp70 protein. | 0.798 |
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