STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM46641.1Tripartite-type tricarboxylate transporter, receptor component TctC. (371 aa)    
Predicted Functional Partners:
SFM46600.1
Putative tricarboxylic transport membrane protein.
 
  
 0.960
SFM38714.1
TctA family transporter.
 
  
 0.912
SFM38742.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
     0.754
SFM46725.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.701
SFM46677.1
Maleate isomerase.
 
     0.691
SFM46654.1
Asp/Glu/Hydantoin racemase.
       0.655
SFM38697.1
Hypothetical protein.
  
  
 0.624
SFM46538.1
Altronate hydrolase.
 
     0.615
SFM46620.1
Hypothetical protein.
       0.590
SFM46578.1
Uncharacterized conserved protein, DUF362 family.
 
     0.578
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.