STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM49508.1Alanine-synthesizing transaminase. (399 aa)    
Predicted Functional Partners:
SFN01564.1
Glutamate synthase (NADPH) GltB3 subunit.
  
 
 0.909
SFM49490.1
Homoserine dehydrogenase.
  
 0.902
SFM93601.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
   
 0.891
SFM53213.1
Chorismate mutase / prephenate dehydratase.
 
 
 0.873
SFM99947.1
Pyruvate carboxylase subunit B.
    
 0.809
SFM72415.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
 
 
 0.782
SFM49474.1
Phosphoglycerate mutase.
     
 0.779
SFM86947.1
Acetyltransferase (GNAT) family protein.
  
 
 0.750
SFN01583.1
Glutamate synthase (NADPH/NADH) large chain; Belongs to the glutamate synthase family.
  
 
 0.730
SFM46791.1
2,4-dienoyl-CoA reductase.
  
 0.713
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
Server load: low (22%) [HD]