STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM51529.1Predicted kinase. (168 aa)    
Predicted Functional Partners:
SFM60249.1
Methyltransferase domain-containing protein.
   
   0.908
SFM74881.1
Hypothetical protein.
   
   0.908
SFM94409.1
Acetyltransferase (GNAT) domain-containing protein.
   
   0.908
SFM51550.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
       0.773
argS
arginyl-tRNA synthetase.
       0.773
SFM51587.1
Sporulation related domain-containing protein.
       0.773
SFM51611.1
Hypothetical protein.
       0.741
SFM51510.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
       0.530
SFM48810.1
ABC-2 type transport system permease protein.
  
     0.413
SFM94162.1
Parallel beta-helix repeat (two copies).
  
     0.406
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.