STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM53553.1Hypothetical protein. (347 aa)    
Predicted Functional Partners:
SFM53510.1
CobN/Magnesium Chelatase.
 
     0.856
SFM53533.1
CobN/Magnesium Chelatase.
 
     0.837
SFM53575.1
Protoporphyrin IX magnesium-chelatase.
       0.756
SFM53595.1
Protoporphyrin IX magnesium-chelatase.
       0.734
SFM49018.1
DHHA1 domain-containing protein.
  
     0.612
SFM53489.1
Iron complex transport system ATP-binding protein.
  
    0.568
SFM53467.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
    0.564
SFM53635.1
CRISPR-associated protein Cst2.
 
     0.503
SFM53448.1
Iron complex transport system substrate-binding protein.
  
    0.451
SFM53424.1
Iron complex outermembrane recepter protein.
       0.431
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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