STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM63344.1Trk system potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. (482 aa)    
Predicted Functional Partners:
SFM63326.1
Trk system potassium uptake protein TrkA.
 
 
 0.991
SFM65039.1
Sodium/proton antiporter, CPA1 family.
 
 
 0.960
SFM79028.1
Trk system potassium uptake protein TrkA.
  
 
 0.851
SFM51675.1
3-octaprenyl-4hydroxybenzoate decarboxylase; Belongs to the UbiD family.
      0.847
SFM50851.1
Voltage-gated potassium channel.
  
 
 0.843
SFM96727.1
Voltage-gated potassium channel.
  
 
 0.843
SFM63373.1
Membrane associated serine protease, rhomboid family.
     
 0.763
SFM63396.1
Hypothetical protein; Belongs to the UPF0235 family.
       0.732
SFM63417.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.538
SFN04519.1
Monovalent cation:H+ antiporter-2, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.485
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.