STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM63396.1Hypothetical protein; Belongs to the UPF0235 family. (103 aa)    
Predicted Functional Partners:
SFM63373.1
Membrane associated serine protease, rhomboid family.
       0.773
SFM63326.1
Trk system potassium uptake protein TrkA.
       0.732
SFM63344.1
Trk system potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
       0.732
SFM63417.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.528
SFM63435.1
3-hydroxyacyl-CoA dehydrogenase.
       0.465
SFM63460.1
butyryl-CoA dehydrogenase.
       0.451
SFM62197.1
YggT family protein.
  
  
 0.428
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.