STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM66511.1Amino acid ABC transporter membrane protein, PAAT family. (331 aa)    
Predicted Functional Partners:
SFM66491.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.998
SFM97633.1
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-); Belongs to the bacterial solute-binding protein 3 family.
 0.993
SFM79589.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 0.992
SFM88598.1
General L-amino acid transport system ATP-binding protein.
 0.992
SFM79635.1
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
 0.989
SFM88614.1
General L-amino acid transport system permease protein.
 
 
 
0.804
SFM88635.1
General L-amino acid transport system permease protein.
 
 
0.793
SFM88651.1
General L-amino acid transport system substrate-binding protein.
 
 0.657
SFM81687.1
Conserved hypothetical protein.
  
 0.581
SFN01202.1
Lipopolysaccharide export system ATP-binding protein.
 
   
 0.550
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.