STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM67116.1Hypothetical protein. (201 aa)    
Predicted Functional Partners:
SFM67134.1
Type II secretion system (T2SS), protein K.
       0.773
SFM67157.1
Hypothetical protein.
       0.773
SFM67182.1
Hypothetical protein.
       0.773
SFM67205.1
General secretion pathway protein D.
       0.682
SFM67068.1
General secretion pathway protein H.
       0.678
SFM67098.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.678
SFM67050.1
General secretion pathway protein F.
       0.624
SFM67032.1
Type II secretion system protein E (GspE).
       0.607
SFM67012.1
Hypothetical protein.
       0.573
SFM66979.1
Phosphorylase superfamily protein.
       0.545
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.