STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM68435.1Hypothetical protein. (245 aa)    
Predicted Functional Partners:
SFM94178.1
Fibronectin type III domain-containing protein.
  
 0.867
SFM94527.1
Hypothetical protein.
  
 0.867
SFM94162.1
Parallel beta-helix repeat (two copies).
   
 
 0.845
SFM68327.1
Phage tail tape measure protein, TP901 family, core region.
     
 0.817
SFM68311.1
Hypothetical protein.
       0.780
SFM68369.1
Hypothetical protein.
       0.780
SFM68346.1
Hypothetical protein.
       0.773
SFM68391.1
Hypothetical protein.
       0.773
SFM68417.1
Hypothetical protein.
       0.773
SFM68462.1
Hypothetical protein.
       0.773
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.