STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM80748.1Glycosyltransferase involved in cell wall bisynthesis. (400 aa)    
Predicted Functional Partners:
SFN10948.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 0.870
SFM81084.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 0.797
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.794
SFM96286.1
Hypothetical protein.
    
 
 0.716
SFM53094.1
N-acetylglucosaminyl deacetylase, LmbE family.
  
 
 0.670
SFM66643.1
Tfp pilus assembly protein PilF.
  
 0.657
SFM80723.1
Nucleoside-diphosphate-sugar epimerase.
  
 
  0.648
SFM80677.1
Sugar transferase, PEP-CTERM/EpsH1 system associated.
 
     0.618
SFM51214.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.606
SFM50012.1
UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.602
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.