STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM81002.1Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family. (72 aa)    
Predicted Functional Partners:
SFM80985.1
Predicted nuclease of the RNAse H fold, HicB family.
 
 
 
 0.991
SFM80959.1
Predicted nuclease of the RNAse H fold, HicB family.
 
 
 
 0.976
SFM80221.1
Predicted nuclease of the RNAse H fold, HicB family.
 
 
 
 0.961
SFM80464.1
Hypothetical protein.
   
 
 0.840
SFM81043.1
Death on curing protein.
 
     0.482
SFN09498.1
Predicted nucleic-acid-binding protein, contains PIN domain.
  
     0.481
SFM80934.1
Hypothetical protein.
       0.406
SFM81018.1
Ribbon-helix-helix domain-containing protein.
       0.400
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.