STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM81391.1TRAP transporter, 4TM/12TM fusion protein. (647 aa)    
Predicted Functional Partners:
SFM81408.1
Hypothetical protein.
 
  0.991
SFM43385.1
Hypothetical protein.
    0.860
SFM72630.1
Hypothetical protein.
    0.853
SFM46379.1
Hypothetical protein.
    0.833
SFM81427.1
Oxaloacetate decarboxylase, beta subunit.
       0.409
SFM81448.1
Oxaloacetate decarboxylase, gamma chain.
       0.409
SFM81468.1
Cyclic nucleotide-binding domain-containing protein.
       0.409
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.