STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM86514.1DNA-3-methyladenine glycosylase III. (232 aa)    
Predicted Functional Partners:
SFM86499.1
Pyruvate formate lyase activating enzyme.
 
     0.815
ilvD-2
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
       0.773
SFM86475.1
Methyltransferase domain-containing protein.
       0.773
SFM86538.1
Nucleotide-binding universal stress protein, UspA family.
       0.773
nadA
Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
      0.643
SFM86416.1
Wyosine [tRNA(Phe)-imidazoG37] synthetase, radical SAM superfamily.
       0.433
SFM86431.1
MerR family transcriptional regulator, heat shock protein HspR.
       0.433
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.