STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM92893.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
SFM92903.1
Transcriptional regulator, TetR family.
       0.773
SFM92878.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
     0.767
SFM62947.1
Hypothetical protein.
  
     0.677
SFM49526.1
Putative Fe-S cluster.
  
     0.665
SFM65524.1
Thymidylate synthase.
  
     0.644
thiC
Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.
       0.541
SFM78625.1
Putative signal transducing protein.
  
     0.523
SFM84739.1
Epoxyqueuosine reductase.
  
     0.513
SFM63718.1
Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5.
  
     0.504
SFM61706.1
Methionine synthase II (cobalamin-independent).
  
     0.464
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.