STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN05701.14-hydroxy-4-methyl-2-oxoglutarate aldolase. (225 aa)    
Predicted Functional Partners:
SFN05759.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.838
SFN05721.1
Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family.
 
   
 0.828
SFN05683.1
DNA-binding transcriptional regulator, GntR family.
 
     0.827
SFN05738.1
Aldehyde:ferredoxin oxidoreductase.
       0.773
SFN05810.1
L-iditol 2-dehydrogenase.
    
  0.766
SFM38833.1
Hypothetical protein.
 
   
 0.754
SFN05777.1
Cupin domain-containing protein.
 
     0.727
SFM53094.1
N-acetylglucosaminyl deacetylase, LmbE family.
    
 0.680
SFM97494.1
Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
    
  0.673
SFN05793.1
Creatinine amidohydrolase.
       0.651
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.