STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN07490.1Phosphomannomutase. (452 aa)    
Predicted Functional Partners:
SFN07572.1
Mannose-1-phosphate guanylyltransferase.
 
 0.983
SFN07523.1
Glucose-1-phosphate thymidylyltransferase.
 
 
 0.971
SFM49654.1
Starch phosphorylase.
 
 
 0.950
SFM40012.1
NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis proteins.
  
 
 0.927
dacA
TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
  
 
 0.912
SFM74930.1
Glycosyltransferase, GT2 family.
  
 0.896
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.885
SFM67335.1
Transketolase.
  
 0.877
SFN05636.1
4-alpha-glucanotransferase.
  
 
 0.866
SFM58932.1
Cytochrome c, mono-and diheme variants.
     
 0.861
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.