STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN09058.1Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (335 aa)    
Predicted Functional Partners:
SFN09077.1
Hypothetical protein.
       0.799
SFM47292.1
Flagellar basal-body rod protein FlgG.
    
 
 0.779
SFN08954.1
PAS domain S-box-containing protein.
  
  
 0.774
SFN08972.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
       0.773
SFN09000.1
Cobalt-precorrin 3 C17-methyltransferase.
       0.773
SFN09011.1
Cobalt-precorrin 5A acetaldehyde-lyase.
       0.773
SFN09035.1
Cobalt-precorrin 4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
       0.773
SFN09183.1
Glycolate oxidase.
  
    0.760
SFN09093.1
TIGR00659 family protein.
       0.757
SFN09121.1
Holin-like protein.
       0.757
Your Current Organism:
Thermodesulforhabdus norvegica
NCBI taxonomy Id: 39841
Other names: DSM 9990, Desulforhabdus acetothermus, T. norvegica, Thermodesulforhabdus norvegicus, strain A8444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.