Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADC48843.1 | ADC48845.1 | BpOF4_03885 | BpOF4_03895 | COG4848 Uncharacterized protein conserved in bacteria; Belongs to the UPF0354 family. | COG3641 Predicted membrane protein, putative toxin regulator. | 0.549 |
ADC48843.1 | ADC48846.1 | BpOF4_03885 | BpOF4_03900 | COG4848 Uncharacterized protein conserved in bacteria; Belongs to the UPF0354 family. | Hypothetical protein. | 0.436 |
ADC48843.1 | trxA-2 | BpOF4_03885 | BpOF4_03890 | COG4848 Uncharacterized protein conserved in bacteria; Belongs to the UPF0354 family. | Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.613 |
ADC48845.1 | ADC48843.1 | BpOF4_03895 | BpOF4_03885 | COG3641 Predicted membrane protein, putative toxin regulator. | COG4848 Uncharacterized protein conserved in bacteria; Belongs to the UPF0354 family. | 0.549 |
ADC48845.1 | ADC48846.1 | BpOF4_03895 | BpOF4_03900 | COG3641 Predicted membrane protein, putative toxin regulator. | Hypothetical protein. | 0.553 |
ADC48845.1 | ectB | BpOF4_03895 | BpOF4_10770 | COG3641 Predicted membrane protein, putative toxin regulator. | Diaminobutyrate--2-oxoglutarate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.453 |
ADC48845.1 | gabT | BpOF4_03895 | BpOF4_10225 | COG3641 Predicted membrane protein, putative toxin regulator. | COG0160 4-aminobutyrate aminotransferase and related aminotransferases. | 0.534 |
ADC48845.1 | trxA-2 | BpOF4_03895 | BpOF4_03890 | COG3641 Predicted membrane protein, putative toxin regulator. | Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.792 |
ADC48846.1 | ADC48843.1 | BpOF4_03900 | BpOF4_03885 | Hypothetical protein. | COG4848 Uncharacterized protein conserved in bacteria; Belongs to the UPF0354 family. | 0.436 |
ADC48846.1 | ADC48845.1 | BpOF4_03900 | BpOF4_03895 | Hypothetical protein. | COG3641 Predicted membrane protein, putative toxin regulator. | 0.553 |
ADC48846.1 | trxA-2 | BpOF4_03900 | BpOF4_03890 | Hypothetical protein. | Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins. | 0.529 |
ectB | ADC48845.1 | BpOF4_10770 | BpOF4_03895 | Diaminobutyrate--2-oxoglutarate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | COG3641 Predicted membrane protein, putative toxin regulator. | 0.453 |
gabT | ADC48845.1 | BpOF4_10225 | BpOF4_03895 | COG0160 4-aminobutyrate aminotransferase and related aminotransferases. | COG3641 Predicted membrane protein, putative toxin regulator. | 0.534 |
trxA-2 | ADC48843.1 | BpOF4_03890 | BpOF4_03885 | Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins. | COG4848 Uncharacterized protein conserved in bacteria; Belongs to the UPF0354 family. | 0.613 |
trxA-2 | ADC48845.1 | BpOF4_03890 | BpOF4_03895 | Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins. | COG3641 Predicted membrane protein, putative toxin regulator. | 0.792 |
trxA-2 | ADC48846.1 | BpOF4_03890 | BpOF4_03900 | Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins. | Hypothetical protein. | 0.529 |