STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC48944.1COG4876 Uncharacterized protein conserved in bacteria. (122 aa)    
Predicted Functional Partners:
ydaG
COG3871 Uncharacterized stress protein (general stress protein 26).
  
    0.808
csbD
Stress response protein sigmaB controlled CsbD; COG3237 Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family.
  
    0.766
yjbC
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
    0.646
ADC49568.1
Hypothetical protein.
  
    0.603
ADC51868.1
Hypothetical protein.
  
    0.597
ADC50678.1
Pyridoxamine 5'-phosphate oxidase-related protein.
   
    0.559
ADC50989.1
Hypothetical protein; COG0702 Predicted nucleoside-diphosphate-sugar epimerases.
   
    0.554
yhgC
Antibiotic biosynthesis monooxygenase; COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides.
   
    0.547
ADC48945.1
COG0517 FOG: CBS domain.
       0.536
ADC51614.1
COG3861 Uncharacterized protein conserved in bacteria.
 
    0.536
Your Current Organism:
Bacillus pseudofirmus
NCBI taxonomy Id: 398511
Other names: B. pseudofirmus OF4, Bacillus pseudofirmus OF4, Bacillus pseudofirmus str. OF4, Bacillus pseudofirmus strain OF4
Server load: low (16%) [HD]