STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC50123.1Alpha,alpha-phosphotrehalase; COG0366 Glycosidases. (559 aa)    
Predicted Functional Partners:
treP
Phosphotransferase system (PTS) trehalose-specific enzyme II, BC component; COG1264 Phosphotransferase system IIB components.
 
 
 0.973
ypqE
PTS system, glucose-specific enzyme II, A component; COG2190 Phosphotransferase system IIA components.
  
 
 0.910
glvA
COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases.
   
 
 0.908
ADC50124.1
GntR family transcriptional repressor of trehalose operon; COG2188 Transcriptional regulators.
 
  
 0.784
yhdG
Putative cationic amino acid transporter APC family; COG0531 Amino acid transporters.
   
 0.723
ptsG-2
PTS system, glucose-specific enzyme II, A component; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
  
  
 0.659
celF
PTS system, glucose-specific IIBC subunit; COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific.
  
  
 0.659
glcK
Glucokinase; COG1940 Transcriptional regulator/sugar kinase.
  
 
 0.560
scrA
Phosphotransferase system (PTS) sucrose-specific enzyme IIBC component; COG1264 Phosphotransferase system IIB components.
 
  
 0.498
fruA
PTS system, fructose-specific enzyme II, BC component; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
     
 0.488
Your Current Organism:
Bacillus pseudofirmus
NCBI taxonomy Id: 398511
Other names: B. pseudofirmus OF4, Bacillus pseudofirmus OF4, Bacillus pseudofirmus str. OF4, Bacillus pseudofirmus strain OF4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.