STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC50238.1Hypothetical protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB. (118 aa)    
Predicted Functional Partners:
ADC49023.1
Hypothetical protein; COG0498 Threonine synthase.
  
    0.784
ADC48243.1
Hypothetical protein.
  
     0.774
ADC48264.1
Hypothetical protein.
  
     0.774
ADC48356.1
Hypothetical protein.
  
     0.774
ADC48408.1
Hypothetical protein.
  
     0.774
kbaA
Activation of the KinB signaling pathway of sporulation; Involved in the activation of the KinB signaling pathway of sporulation.
  
     0.774
ADC51125.1
Hypothetical protein.
  
     0.774
qcrC
Menaquinol-cytochrome c reductase cytochrome b/c subunit; Component of the menaquinol-cytochrome c reductase complex.
  
     0.774
ADC51917.1
Hypothetical protein.
  
     0.772
cccA
COG2010 Cytochrome c, mono- and diheme variants.
  
     0.771
Your Current Organism:
Bacillus pseudofirmus
NCBI taxonomy Id: 398511
Other names: B. pseudofirmus OF4, Bacillus pseudofirmus OF4, Bacillus pseudofirmus str. OF4, Bacillus pseudofirmus strain OF4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.