Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADC48405.1 | ADC49706.1 | BpOF4_01685 | BpOF4_08240 | Hypothetical protein. | Hypothetical protein. | 0.728 |
ADC48405.1 | ADC49888.1 | BpOF4_01685 | BpOF4_09160 | Hypothetical protein. | COG2834 Outer membrane lipoprotein-sorting protein. | 0.763 |
ADC48405.1 | ADC50256.1 | BpOF4_01685 | BpOF4_11015 | Hypothetical protein. | Hypothetical protein. | 0.751 |
ADC48405.1 | ADC50391.1 | BpOF4_01685 | BpOF4_11690 | Hypothetical protein. | Hypothetical protein. | 0.753 |
ADC48405.1 | cotE | BpOF4_01685 | BpOF4_19520 | Hypothetical protein. | Spore coat protein E. | 0.746 |
ADC48405.1 | gerD | BpOF4_01685 | BpOF4_08770 | Hypothetical protein. | Spore germination protein GerD. | 0.764 |
ADC48405.1 | gerM-2 | BpOF4_01685 | BpOF4_03070 | Hypothetical protein. | COG5401 Spore germination protein. | 0.748 |
ADC48405.1 | rsfA | BpOF4_01685 | BpOF4_00755 | Hypothetical protein. | Pre-spore transcriptional factor RsfA. | 0.765 |
ADC48405.1 | rsfA-2 | BpOF4_01685 | BpOF4_11800 | Hypothetical protein. | Putative spore coat protein regulator protein RsfA. | 0.770 |
ADC48405.1 | spoVID | BpOF4_01685 | BpOF4_02915 | Hypothetical protein. | Stage VI sporulation protein D; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | 0.765 |
ADC49706.1 | ADC48405.1 | BpOF4_08240 | BpOF4_01685 | Hypothetical protein. | Hypothetical protein. | 0.728 |
ADC49706.1 | ADC49888.1 | BpOF4_08240 | BpOF4_09160 | Hypothetical protein. | COG2834 Outer membrane lipoprotein-sorting protein. | 0.757 |
ADC49706.1 | ADC50256.1 | BpOF4_08240 | BpOF4_11015 | Hypothetical protein. | Hypothetical protein. | 0.755 |
ADC49706.1 | ADC50391.1 | BpOF4_08240 | BpOF4_11690 | Hypothetical protein. | Hypothetical protein. | 0.713 |
ADC49706.1 | cotE | BpOF4_08240 | BpOF4_19520 | Hypothetical protein. | Spore coat protein E. | 0.763 |
ADC49706.1 | gerD | BpOF4_08240 | BpOF4_08770 | Hypothetical protein. | Spore germination protein GerD. | 0.769 |
ADC49706.1 | gerM-2 | BpOF4_08240 | BpOF4_03070 | Hypothetical protein. | COG5401 Spore germination protein. | 0.734 |
ADC49706.1 | rsfA | BpOF4_08240 | BpOF4_00755 | Hypothetical protein. | Pre-spore transcriptional factor RsfA. | 0.770 |
ADC49706.1 | rsfA-2 | BpOF4_08240 | BpOF4_11800 | Hypothetical protein. | Putative spore coat protein regulator protein RsfA. | 0.768 |
ADC49706.1 | spoVID | BpOF4_08240 | BpOF4_02915 | Hypothetical protein. | Stage VI sporulation protein D; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains). | 0.744 |
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