STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC50862.1COG0390 ABC-type uncharacterized transport system, permease component. (259 aa)    
Predicted Functional Partners:
ADC50861.1
Phosphate ABC transporter ATP-binding protein; COG1117 ABC-type phosphate transport system, ATPase component; Belongs to the ABC transporter superfamily.
    0.876
ADC50863.1
Hypothetical protein.
       0.639
ADC50864.1
Hypothetical protein; COG3872 Predicted metal-dependent enzyme.
       0.615
thiD
COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
       0.477
Your Current Organism:
Bacillus pseudofirmus
NCBI taxonomy Id: 398511
Other names: B. pseudofirmus OF4, Bacillus pseudofirmus OF4, Bacillus pseudofirmus str. OF4, Bacillus pseudofirmus strain OF4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.