STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAmethionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (182 aa)    
Predicted Functional Partners:
msrB
Methionine sulfoxide reductase B; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase.
 
 0.997
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.755
trxA-2
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
 0.575
brxA
Bacilliredoxin; COG0695 Glutaredoxin and related proteins.
  
 
 0.574
ADC48279.1
Small peptidoglycan-associated lipoprotein; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
 0.557
yusE
Putative thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
   
 0.557
ADC50877.1
Xanthine/uracil permease family protein; COG2252 Permeases.
       0.490
ADC49928.1
COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the sulfur carrier protein TusA family.
   
 
 0.474
metH
5-methyltetrahydrofolate S-homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.436
ADC51299.1
Maltose transacetylase (maltose O-acetyltransferase); COG0110 Acetyltransferase (isoleucine patch superfamily).
      0.417
Your Current Organism:
Bacillus pseudofirmus
NCBI taxonomy Id: 398511
Other names: B. pseudofirmus OF4, Bacillus pseudofirmus OF4, Bacillus pseudofirmus str. OF4, Bacillus pseudofirmus strain OF4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.