STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_0049KEGG: PhoH family protein; PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc. (458 aa)    
Predicted Functional Partners:
Bccel_3392
KEGG: putative Ser protein kinase; PFAM: PrkA AAA domain protein, PrkA serine kinase; SMART: PrkA AAA domain protein.
  
  
 0.731
Bccel_3391
UPF0229 protein yeaH; TIGRFAM: sporulation protein YhbH; HAMAP : UPF0229 protein yeaH; KEGG: sporulation protein YhbH; PFAM: protein of unknown function DUF444; Belongs to the UPF0229 family.
  
    0.617
Bccel_3390
PFAM: SpoVR family protein; KEGG: SpoVR family protein.
  
    0.600
Bccel_1876
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
   
  
 0.581
Bccel_3728
TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G, RNA binding S1 domain protein; KEGG: RNAse G; SMART: RNA-binding domain, S1.
  
    0.571
Bccel_0047
PFAM: Spore coat assembly protein CotJB, domain; KEGG: spore coat protein CotJB.
  
    0.563
Bccel_3229
PFAM: protein of unknown function DUF6 transmembrane; KEGG: DMT(drug/metabolite transporter) superfamily permease.
  
    0.496
Bccel_0483
PFAM: protein of unknown function DUF6 transmembrane; KEGG: putative permease, DMT superfamily.
  
    0.461
Bccel_3983
Hypothetical protein; KEGG: glucose-1-phosphate adenylyltransferase.
   
  
 0.402
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
  
 0.402
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.