STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_0108Hypothetical protein. (190 aa)    
Predicted Functional Partners:
Bccel_0105
PFAM: tail tape measure protein TP901 core region-containing protein; KEGG: minor tail protein.
       0.773
Bccel_0106
KEGG: hypothetical protein.
       0.773
Bccel_0107
KEGG: hypothetical protein.
       0.773
Bccel_0109
PFAM: Hemolysin XhlA; KEGG: hypothetical protein.
       0.596
Bccel_0110
PFAM: cell wall hydrolase/autolysin; KEGG: cell wall hydrolase/autolysin.
       0.547
Bccel_0111
KEGG: hypothetical protein.
       0.547
Bccel_0112
KEGG: DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase.
       0.431
Bccel_0104
KEGG: hypothetical protein.
       0.407
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.