Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_0153PFAM: copper amine oxidase-like domain-containing protein; KEGG: sugar ABC transporter periplasmic protein. (560 aa)    
Predicted Functional Partners:
Bccel_2007
PFAM: ABC-type transporter, integral membrane subunit; KEGG: carbohydrate ABC transporter membrane protein 1.
 
 0.904
Bccel_2622
Glycerol-3-phosphate-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: sugar ABC transporter ATP-binding protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 0.896
Bccel_1489
Hypothetical protein; KEGG: sugar ABC transporter permease.
 
 0.887
Bccel_2129
PFAM: ABC-type transporter, integral membrane subunit; KEGG: sugar ABC transporter permease.
 
 0.878
Bccel_2006
PFAM: ABC-type transporter, integral membrane subunit; KEGG: carbohydrate ABC transporter membrane protein 2.
 
 0.850
Bccel_2130
PFAM: ABC-type transporter, integral membrane subunit; KEGG: sugar ABC transporter permease.
 
 0.798
Bccel_3089
PFAM: ABC-type transporter, integral membrane subunit; KEGG: carbohydrate ABC transporter membrane protein 2.
 
 0.798
Bccel_3295
PFAM: ABC-type transporter, integral membrane subunit; KEGG: sugar ABC transporter permease.
 
 0.797
Bccel_1490
PFAM: ABC-type transporter, integral membrane subunit; KEGG: sugar ABC transporter permease.
 
 0.795
Bccel_0152
PFAM: copper amine oxidase-like domain-containing protein; KEGG: peptidase S41.
   
  
0.761
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.