STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_0200KEGG: stage V sporulation protein E; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family. (369 aa)    
Predicted Functional Partners:
Bccel_5265
PFAM: penicillin-binding protein transpeptidase, Penicillin-binding protein dimerization domain-containing protein; KEGG: cell division protein FtsI/penicillin-binding protein 2.
 
 0.991
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
 0.983
Bccel_0196
Putative PASTA sensor protein; PFAM: penicillin-binding protein transpeptidase, Penicillin-binding protein dimerization domain-containing protein, PASTA domain containing protein; KEGG: cell division protein FtsI/penicillin-binding protein 2; SMART: PASTA domain containing protein.
 
 0.982
Bccel_0136
PFAM: penicillin-binding protein transpeptidase, Penicillin-binding protein dimerization domain-containing protein; KEGG: peptidoglycan glycosyltransferase.
 
 0.971
Bccel_2570
PFAM: penicillin-binding protein transpeptidase, PASTA domain containing protein, Penicillin-binding protein dimerization domain-containing protein; KEGG: cell division protein FtsI/penicillin-binding protein 2; SMART: PASTA domain containing protein.
 
 0.968
mraY
Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.958
murF
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
 
 
 0.939
Bccel_2352
TIGRFAM: penicillin-binding protein 2; KEGG: peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase, Penicillin-binding protein dimerization domain-containing protein.
 
 0.936
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
 0.919
Bccel_0286
KEGG: cell division septal protein.
  
 
 0.917
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.