STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_0220Oleoyl-(acyl-carrier-protein) hydrolase; KEGG: putative thioesterase involved in non-ribosomal peptide biosynthesis; PFAM: Thioesterase. (253 aa)    
Predicted Functional Partners:
Bccel_2229
6-deoxyerythronolide-B synthase, 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Acyl transferase, Beta-ketoacyl synthase, KR domain protein, acyl carrier protein familyprotein; KEGG: polyketide synthase family protein; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase/Fatty acid synthase, KR, Polyketide synthase, acyl transferase domain-containing protein.
 
 
 0.980
Bccel_1479
6-deoxyerythronolide-B synthase; PFAM: KR domain protein, acyl carrier protein familyprotein, Beta-ketoacyl synthase, Acyl transferase; KEGG: polyketide synthase family protein; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase/Fatty acid synthase, KR, Polyketide synthase, acyl transferase domain-containing protein.
 
 
 0.979
Bccel_1682
KEGG: thioester reductase; TIGRFAM: thioester reductase domain protein; PFAM: Male sterility domain-containing protein.
 
 0.970
Bccel_0225
6-deoxyerythronolide-B synthase, Phenylalanine racemase (ATP-hydrolyzing); PFAM: Beta-ketoacyl synthase, Uncharacterized protein YobF, acyl carrier protein familyprotein, KR domain protein; KEGG: beta-ketoacyl synthase; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase/Fatty acid synthase, KR.
 
 0.947
Bccel_0223
Amino acid adenylation domain protein; SMART: Polyketide synthase, beta-ketoacyl synthase region-containing protein, Polyketide synthase, phosphopantetheine-binding protein; TIGRFAM: amino acid adenylation domain protein; KEGG: hybrid nonribosomal peptide synthetase/polyketide synthase; PFAM: AMP-dependent synthetase and ligase, Beta-ketoacyl synthase, acyl carrier protein familyprotein, condensation domain protein.
 
 0.946
Bccel_0221
SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: amino acid adenylation domain protein; KEGG: AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase, condensation domain protein, Queuosine synthesis-like protein, cobalamin B12-binding domain protein, acyl carrier protein familyprotein, Radical SAM domain protein.
 
     0.927
Bccel_1100
TIGRFAM: amino acid adenylation domain protein; KEGG: amino acid adenylation protein; PFAM: AMP-dependent synthetase and ligase, Thioesterase, type IV pilus assembly PilZ, condensation domain protein, acyl carrier protein familyprotein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.927
Bccel_5613
TIGRFAM: non-ribosomal peptide synthetase domain protein, amino acid adenylation domain protein; KEGG: non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase, acyl carrier protein familyprotein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.916
Bccel_0222
Malonyl CoA-acyl carrier protein transacylase; SMART: Polyketide synthase, acyl transferase domain-containing protein; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; KEGG: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase.
 
 
 0.902
Bccel_0218
TIGRFAM: amino acid adenylation domain protein, non-ribosomal peptide synthase; KEGG: non-ribosomal peptide synthase/amino acid adenylation enzyme; PFAM: AMP-dependent synthetase and ligase, condensation domain protein, acyl carrier protein familyprotein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.901
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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