Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_0261KEGG: Phage tail sheath protein. (442 aa)    
Predicted Functional Partners:
Bccel_0268
PFAM: Phage-like element PBSX protein, XkdS; KEGG: Phage-like element PBSX protein, XkdS.
 
 
 0.980
Bccel_1579
PFAM: Phage-like element PBSX protein, XkdS; KEGG: Phage-like element PBSX protein, XkdS.
 
 
 0.973
Bccel_0265
KEGG: cell wall hydrolase; PFAM: Peptidoglycan-binding lysin domain-containing protein; SMART: Peptidoglycan-binding LysM.
 
 
 0.970
Bccel_0269
PFAM: Baseplate J family protein; KEGG: baseplate J.
 
 
 0.968
Bccel_1577
PFAM: Protein of unknown function DUF2313; KEGG: hypothetical protein.
 
 
 0.966
Bccel_0270
PFAM: Protein of unknown function DUF2313; KEGG: hypothetical protein.
 
 
 0.965
Bccel_0262
PFAM: XkdM protein, phage-like element PBSX; KEGG: core tail protein.
 
  
 0.963
Bccel_1582
KEGG: cell wall hydrolase; PFAM: Peptidoglycan-binding lysin domain-containing protein; SMART: Peptidoglycan-binding LysM.
 
 
 0.959
Bccel_0585
KEGG: hypothetical protein.
  
 
 0.957
Bccel_0587
PFAM: GPW/gp25 family protein; KEGG: hypothetical protein.
  
 
 0.957
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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