Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_0331SMART: protein phosphatase 2C domain protein; KEGG: protein serine/threonine phosphatase. (278 aa)    
Predicted Functional Partners:
Bccel_3403
PFAM: protein kinase, PASTA domain containing protein; KEGG: serine/threonine protein kinase with PASTA sensor(s); SMART: serine/threonine protein kinase, PASTA domain containing protein.
 
 
 0.964
Bccel_2765
KEGG: serine/threonine protein kinase; PFAM: protein kinase; SMART: serine/threonine protein kinase.
 
 
 0.910
Bccel_5735
KEGG: hypothetical protein; PFAM: protein kinase; SMART: serine/threonine protein kinase.
 
 
 0.860
Bccel_1998
PFAM: protein kinase; KEGG: Serine/threonine protein kinase fused to TPR repeats domain; SMART: serine/threonine protein kinase.
 
 
 0.853
Bccel_2307
PFAM: protein kinase, Ig domain protein group 2 domain protein; KEGG: serine/threonine protein kinase; SMART: serine/threonine protein kinase.
 
 
 0.853
Bccel_5722
PFAM: protein kinase, NHL repeat containing protein; KEGG: Serine/threonine protein kinase fused to TPR repeats domain; SMART: serine/threonine protein kinase.
 
 
 0.853
Bccel_0330
KEGG: FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein.
 
   
 0.845
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.789
Bccel_0332
PFAM: peptidase A24A prepilin type IV; KEGG: Flp pilus assembly protein, protease CpaA.
       0.781
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.764
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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