STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_0610PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: hypothetical protein. (373 aa)    
Predicted Functional Partners:
Bccel_5158
Putative phytochrome sensor protein; SMART: GGDEF domain containing protein, GAF domain protein; TIGRFAM: diguanylate cyclase; KEGG: putative PAS/PAC sensor protein; PFAM: GGDEF domain containing protein, protein kinase.
 
 0.999
Bccel_0617
Integral membrane sensor hybrid histidine kinase; KEGG: sensor protein; PFAM: response regulator receiver, ATP-binding region ATPase domain protein, histidine kinase A domain protein, Diverse 7TM receptor transmembrane region, histidine kinase internal region; SMART: response regulator receiver, histidine kinase A domain protein, ATP-binding region ATPase domain protein.
 0.997
Bccel_1081
Serine/threonine protein kinase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein, Tetratricopeptide repeat-containing protein, protein kinase; KEGG: hstK, serine/threonine kinase; SMART: GGDEF domain containing protein, serine/threonine protein kinase, Tetratricopeptide repeat-containing protein, GAF domain protein.
 0.997
Bccel_4610
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold-4 domain protein, PAS fold-3 domain protein, response regulator receiver, Hpt domain protein; KEGG: signal transduction histidine kinase-like protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAC repeat-containing protein, GAF domain protein, PAS domain containing protein, response regulator receiver.
 
 0.997
Bccel_5049
Putative phytochrome sensor protein; TIGRFAM: diguanylate cyclase; PFAM: protein kinase, GGDEF domain containing protein; KEGG: ATPase; SMART: GGDEF domain containing protein, GAF domain protein.
 0.997
Bccel_1546
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold-3 domain protein, histidine kinase A domain protein; KEGG: PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein, PAC repeat-containing protein.
 0.996
Bccel_2559
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver, PAS domain containing protein; KEGG: signal transduction histidine kinase; SMART: response regulator receiver, ATP-binding region ATPase domain protein, PAS domain containing protein, histidine kinase A domain protein.
 0.996
Bccel_5061
KEGG: multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, Hpt domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver.
 
 0.996
Bccel_5281
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; KEGG: multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein.
 0.996
Bccel_1210
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold-3 domain protein, response regulator receiver, PAS domain containing protein, histidine kinase A domain protein; KEGG: PAS domain-containing protein; SMART: ATP-binding region ATPase domain protein, PAC repeat-containing protein, response regulator receiver, histidine kinase A domain protein, PAS domain containing protein.
 
 0.995
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.