Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_0652PFAM: S-layer domain-containing protein, Cadherin-like beta sandwich domain; KEGG: putative S-layer protein. (1231 aa)    
Predicted Functional Partners:
Bccel_0651
TIGRFAM: protein of unknown function DUF11; KEGG: 3-carboxy-cis,cis-muconate lactonizing enzyme.
 
     0.819
Bccel_4964
PFAM: S-layer domain-containing protein; KEGG: S-layer protein; overlaps another CDS with the same product name.
  
     0.773
Bccel_1209
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase-like protein.
  
     0.772
Bccel_1881
PFAM: copper amine oxidase-like domain-containing protein, cellulosome anchoring protein cohesin region; KEGG: cellulosome anchoring protein cohesin subunit.
  
     0.772
Bccel_2290
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase family protein.
  
     0.772
Bccel_3327
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase-like domain-containing protein.
  
     0.772
Bccel_4424
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase family protein.
  
     0.772
Bccel_4630
PFAM: S-layer domain-containing protein; KEGG: hypothetical protein.
  
     0.772
Bccel_5682
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase-like domain-containing protein.
  
     0.772
Bccel_0915
PFAM: copper amine oxidase-like domain-containing protein; KEGG: copper amine oxidase family protein.
  
     0.771
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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