Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_0691KEGG: G-D-S-L family lipolytic protein. (213 aa)    
Predicted Functional Partners:
Bccel_4009
PFAM: glycoside hydrolase family 3 domain protein; KEGG: beta-N-acetylhexosaminidase; Belongs to the glycosyl hydrolase 3 family.
   
 0.880
Bccel_3093
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10, glycoside hydrolase family 11; KEGG: beta-1,4-xylanase; SMART: glycoside hydrolase family 10; Belongs to the glycosyl hydrolase 10 (cellulase F) family.
 
 
 0.801
Bccel_3489
Hypothetical protein; KEGG: fibronectin type III domain-containing protein.
   
 0.784
Bccel_5100
Sialate O-acetylesterase; KEGG: dockerin-like protein; PFAM: protein of unknown function DUF303 acetylesterase.
  
     0.757
Bccel_2113
Sialate O-acetylesterase; KEGG: dockerin-like protein; PFAM: protein of unknown function DUF303 acetylesterase.
  
     0.755
Bccel_3125
Alpha-galactosidase; PFAM: Carbohydrate binding family 6, glycoside hydrolase clan GH-D; KEGG: family 6 carbohydrate binding protein; SMART: cellulose binding type IV.
 
  
  0.730
Bccel_3077
PFAM: esterase; KEGG: family 6 carbohydrate binding protein.
 
 
 0.642
Bccel_5153
PFAM: Endoglucanase H/Glycosyl hydrolase family 26; KEGG: beta-mannanase; Belongs to the glycosyl hydrolase 26 family.
   
 0.642
Bccel_0386
PFAM: glycoside hydrolase family 5; KEGG: glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.597
Bccel_0791
Hypothetical protein.
   
 0.569
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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