Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_0835Peptidase C1A papain; KEGG: hypothetical protein; PFAM: peptidase C1A papain; SMART: peptidase C1A papain. (695 aa)    
Predicted Functional Partners:
rpsK
Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
   
 0.782
Bccel_3362
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen.
    
 0.630
Bccel_5580
KEGG: small redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; PFAM: Thioredoxin-like fold-containing protein.
    
 0.630
Bccel_0834
KEGG: cell surface protein.
       0.542
Bccel_2319
PFAM: Endonuclease I; KEGG: extracellular ribonuclease.
  
     0.528
Bccel_3600
KEGG: hypothetical protein.
    
 0.498
Bccel_3963
KEGG: hypothetical protein.
    
 0.498
nnrD
ADP/ATP-dependent (S)-NAD(P)H-hydrate dehydratase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to [...]
   
   0.485
Bccel_1293
PFAM: leucine-rich repeat-containing protein; KEGG: small GTP-binding protein.
   
 0.430
Bccel_5718
Thermolysin; KEGG: npr, bacillolysin precursor; PFAM: peptidase M4 thermolysin, Propeptide peptidase M4 and M36, PepSY domain, Peptidase M4 thermolysin.
  
     0.409
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.