STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_0853KEGG: hypothetical protein. (187 aa)    
Predicted Functional Partners:
Bccel_0850
PFAM: ABC-type transporter, integral membrane subunit; KEGG: cobalt transporter.
 
 0.993
Bccel_2502
PFAM: ABC-type transporter, integral membrane subunit; KEGG: cobalt transporter.
 
 0.939
Bccel_4577
KEGG: cobalt ABC transporter permease; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: ABC-type transporter, integral membrane subunit.
 
 0.918
Bccel_3287
Cobalt ABC transporter, inner membrane subunit CbiQ; KEGG: cbiQ, Transmembrane component CbiQ of energizing module of cobalt ECF transporter; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: ABC-type transporter, integral membrane subunit.
  
 0.907
Bccel_0852
Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: cobalt ABC transporter ATPase; SMART: AAA ATPase.
     0.902
Bccel_3495
PFAM: BioY protein; KEGG: hypothetical protein.
 
 
 0.898
Bccel_4578
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein, PDGLE domain; KEGG: cobalamin (vitamin B12) biosynthesis CbiM protein.
 
 0.846
Bccel_5426
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein, PDGLE domain; KEGG: cobalamin (vitamin B12) biosynthesis CbiM protein.
 
 0.845
cbiM
Cobalamin biosynthesis protein CbiM-like protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
 0.817
Bccel_0851
Sulfate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: CbiO, ABC-type cobalt transport system, ATPase component; SMART: AAA ATPase.
     0.814
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.