STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_0869Subtilisin; KEGG: intracellular serine protease; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family. (325 aa)    
Predicted Functional Partners:
Bccel_1403
PFAM: S-layer domain-containing protein, cellulosome anchoring protein cohesin region; KEGG: S-layer-like domain-containing protein.
      0.874
Bccel_2919
PFAM: S-layer domain-containing protein; KEGG: S-layer protein.
      0.825
Bccel_1928
PFAM: S-layer domain-containing protein; KEGG: S-layer protein.
 
  
  0.711
secY
Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
 
 0.580
Bccel_2319
PFAM: Endonuclease I; KEGG: extracellular ribonuclease.
 
  
 0.536
Bccel_3225
Thermitase; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin, type 3a cellulose-binding domain protein; KEGG: subtilisin-like serine protease; SMART: type 3a cellulose-binding domain protein; Belongs to the peptidase S8 family.
  
 
0.531
Bccel_1427
Thermitase; KEGG: peptidase S8/S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family.
  
 
0.520
Bccel_1258
Thermitase; KEGG: peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family.
  
 
 
0.499
Bccel_0870
KEGG: hypothetical protein; TIGRFAM: RHS repeat-associated core domain-containing protein; PFAM: Insecticide toxin TcdB middle/N-terminal region, Insecticide toxin TcdB middle/C-terminal region.
  
    0.485
Bccel_0873
KEGG: hypothetical protein.
  
 
 0.479
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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