Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bccel_0871PFAM: Insecticidal toxin complex/plasmid viulence protein; KEGG: hypothetical protein. (751 aa)    
Predicted Functional Partners:
Bccel_0873
KEGG: hypothetical protein.
 
 
 0.995
Bccel_0875
KEGG: hypothetical protein.
 
 
 0.995
Bccel_0872
KEGG: hypothetical protein.
     0.994
Bccel_0874
KEGG: hypothetical protein.
      0.973
Bccel_0870
KEGG: hypothetical protein; TIGRFAM: RHS repeat-associated core domain-containing protein; PFAM: Insecticide toxin TcdB middle/N-terminal region, Insecticide toxin TcdB middle/C-terminal region.
 
 
 0.939
Bccel_5061
KEGG: multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, Hpt domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver.
   
 0.782
Bccel_5811
KEGG: YD repeat protein.
  
 
 0.740
Bccel_5820
KEGG: YD repeat protein.
  
 
 0.740
Bccel_5768
KEGG: YD repeat protein.
  
 
 0.739
Bccel_5781
KEGG: YD repeat protein.
  
 
 0.739
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.