Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_0887TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (256 aa)    
Predicted Functional Partners:
Bccel_1240
PFAM: acriflavin resistance protein; KEGG: Cation efflux system protein, AcrB/AcrF/AcrD family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.978
Bccel_0888
PFAM: MacB-like periplasmic core domain, protein of unknown function DUF214; KEGG: hypothetical protein.
 
 
 0.974
Bccel_0890
PFAM: protein of unknown function DUF214; KEGG: hypothetical protein.
 
 
 0.974
Bccel_0892
Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase.
 
 
 0.922
Bccel_0889
KEGG: hypothetical protein.
  
 
 0.901
Bccel_0891
Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase.
 
 
 0.876
Bccel_3697
PFAM: MacB-like periplasmic core domain, protein of unknown function DUF214; KEGG: lipoprotein release ABC transporter permease.
 
 
 0.845
Bccel_1242
PFAM: Spore coat protein CotH, Intermediate filament domain protein, Fn3 associated repeat; KEGG: spore coat protein CotH.
  
 0.842
Bccel_1274
PFAM: Spore coat protein CotH, Fn3 associated repeat, Intermediate filament domain protein; KEGG: spore coat protein CotH.
  
 0.842
Bccel_2493
PFAM: Spore coat protein CotH, Fn3 associated repeat, Intermediate filament domain protein; KEGG: spore coat protein CotH.
  
 0.842
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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