Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bccel_0922PFAM: Spore coat protein CotH, Carbohydrate-binding CenC domain protein; KEGG: putative carbohydrate binding protein. (661 aa)    
Predicted Functional Partners:
Bccel_4199
PFAM: Lanthionine synthetase C family protein, Domain of unknown function DUF4135; KEGG: hypothetical protein.
  
    0.750
Bccel_4222
PFAM: Lanthionine synthetase C family protein; KEGG: Lanthionine synthetase C family protein.
  
    0.745
Bccel_0426
KEGG: cytidyltransferase-related domain-containing protein; TIGRFAM: cytidyltransferase-related domain protein; PFAM: Citrate lyase ligase domain protein.
     
  0.726
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
  0.726
Bccel_4217
Xenobiotic-transporting ATPase; PFAM: peptidase C39 bacteriocin processing, ABC transporter transmembrane region, ABC transporter related protein; KEGG: ABC transporter; SMART: AAA ATPase.
  
   
 0.691
Bccel_4219
Xenobiotic-transporting ATPase; PFAM: peptidase C39 bacteriocin processing, ABC transporter related protein, ABC transporter transmembrane region; KEGG: ABC transporter; SMART: AAA ATPase.
  
   
 0.691
Bccel_4223
Lantibiotic modifying enzyme, RumM; KEGG: Lanthionine synthetase C family protein; TIGRFAM: Lantibiotic modifying enzyme, RumM; PFAM: Domain of unknown function DUF4135.
  
    0.675
Bccel_0032
PFAM: Protein beta; KEGG: hypothetical protein.
  
     0.645
Bccel_1107
Hypothetical protein; KEGG: BNR/Asp-box repeat-containing protein.
  
     0.632
Bccel_4203
Accessory protein regulator protein B; May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor; Belongs to the AgrB family.
  
   
 0.630
Your Current Organism:
Pseudobacteroides cellulosolvens
NCBI taxonomy Id: 398512
Other names: Bacteroides cellulosolvens ATCC 35603, Bacteroides cellulosolvens DSM 2933, P. cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933, Pseudobacteroides cellulosolvens DSM 2933 = ATCC 35603
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